[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20040204C-003594
Length:
842
Sequence:
[FASTA format sequence]
CTTTTATGAT TTAACGTTAC TGTGTAAGTA CTTTCCCACA TTGCTACACT TGCTTGGTGG
TTCTCATGGA AATTCCATTT TCCATGATCT TGACATTCTG GCTGGTGTTT CTGTCATCGT
CGACTCTGGC TTTCTGTTAC CTGAGTCAGG GTGTCTCTCC GGTCTGAGCT CTCGATCACA
CTTAGCTTTC CTCTTGCATG TCCTGTGTCA AGCAGCTTCT TCTTCGTCCA CTCTTGTGAA
ACCTTCTGAC CGGAGGCTGC TACAGCCTTG CCACTTCCTT TACGGGGCTC AAGCCCCCTC
ACACCCGTCA TGCTCACTAG TACCCGATCA TCCTCTGCCC GGGAGTGCCA CCCCAGTTAA
CTGCCCAGGG ATTCCGTCTC CACCAAAGAG CCTCTGCAAA CCCTGCCTCC TGGAAAAACC
TCTTCCCTAT TGGTAATCCA TGAATGCTAA GATGCATTGT AGATATAATT TATATTCACG
GCCATTTATG CCCTGCCTTA TGTAGGCAGT TCAGCACCAA GGAGAGTGCC TGTTTGCTTT
TGCTTGGGTG CAAGGTCAGT GGAGGATTTA CTGTGTTTAG GGCTCTGTAG TGCTGTTGGC
ACGATGTAAT TTTTCCATAA TAGATGAAAA GCCAAACCCT GTATAAACAC ACTTTAATAA
TGGTGAAGGC ACTGGCAGAG TTGTGTGCCG AGGAAATATT AAAGTTCACA CTCCTGTAGC
TTAGACTTAA TTGAAGCCAG TAGTCTTCGT ATTTACATTT GGGTTGTTTG TTTGAATGTC
AGACCTGGAG TGCTTCATCA GATGTCTTCC ACTCCTCTAC GTATAACTGC TTTAACCACC
TG
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | PTCHD2 | KIAA1337 protein | 30.4 | 1.5 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Gm1459 | similar to hypothetical protein FLJ14299 | 33.5 | 0.15 |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens cDNA FLJ14337 fis, clone PLACE4000494. | 38.2 | 0.72 | |
|
|
| BY221865 RIKEN full-length enriched, activated spleen Mus musculus cDNA clone F830224E07 5', mRNA sequence | 38.2 | 0.72 | |
|
|
| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833408G04 product:unclassifiable, full insert sequence | 38.2 | 0.72 | |
|
|
| 911545 MARC 4PIG Sus scrofa cDNA 5', mRNA sequence | 38.2 | 0.72 | |
|
|
| AGENCOURT_7260644 NIH_MGC_71 Homo sapiens cDNA clone IMAGE:5785376 5', mRNA sequence | 36.2 | 2.8 | |
|
|
| BX091990 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998P0786 ; IMAGE:111222, mRNA sequence | 36.2 | 2.8 | |
|
|
| 603614227F1 NIH_MGC_108 Homo sapiens cDNA clone IMAGE:5420143 5', mRNA sequence | 36.2 | 2.8 | |
|
|
| Homo sapiens delta-notch-like EGF repeat-containing transmembrane (DNER), mRNA | 36.2 | 2.8 | |
|
|
| Homo sapiens chromosome 1 open reading frame 21 (C1orf21), mRNA | 36.2 | 2.8 | |
|
|
| ue20g07.x1 Sugano mouse embryo mewa Mus musculus cDNA clone IMAGE:1480956 3'. | 36.2 | 2.8 |
|
20040204C-003594 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SPL01_0053_F09.b.ab1 : nnnnggcattgtactaagacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0053_F08.b.ab1 : nnnttgctaggactatnacagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20040204C-003594 : .......................CTTTTATGATTTAACGTTACTGTGTAAGTACTTTCCC
---------+---------+---------+---------+---------+---------+ 37
SPL01_0053_F09.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxCTTTTATGATTTAACGTTACTGTGTAAGTACTTTCCC
SPL01_0053_F08.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxCTTTTATGATTTAACGTTACTGTGTAAGTACTTTCCC
20040204C-003594 : ACATTGCTACACTTGCTTGGTGGTTCTCATGGAAATTCCATTTTCCATGATCTTGACATT
---------+---------+---------+---------+---------+---------+ 97
SPL01_0053_F09.b.ab1 : ACATTGCTACACTTGCTTGGTGGTTCTCATGGAAATTCCATTTTCCATGATCTTGACATT
SPL01_0053_F08.b.ab1 : ACATTGCTACACTTGCTTGGTGGTTCTCATGGAAATTCCATTTTCCATGATCTTGACATT
20040204C-003594 : CTGGCTGGTGTTTCTGTCATCGTCGACTCTGGCTTTCTGTTACCTGAGTCAGGGTGTCTC
---------+---------+---------+---------+---------+---------+ 157
SPL01_0053_F09.b.ab1 : CTGGCTGGTGTTTCTGTCATCGTCGACTCTGGCTTTCTGTTACCTGAGTCAGGGTGTCTC
SPL01_0053_F08.b.ab1 : CTGGCTGGTGTTTCTGTCATCGTCGACTCTGGCTTTCTGTTACCTGAGTCAGGGTGTCTC
20040204C-003594 : TCCGGTCTGAGCTCTCGATCACACTTAGCTTTCCTCTTGCATGTCCTGTGTCAAGCAGCT
---------+---------+---------+---------+---------+---------+ 217
SPL01_0053_F09.b.ab1 : TCCGGTCTGAGCTCTCGATCACACTTAGCTTTCCTCTTGCATGTCCTGTGTCAAGCAGCT
SPL01_0053_F08.b.ab1 : TCCGGTCTGAGCTCTCGATCACACTTAGCTTTCCTCTTGCATGTCCTGTGTCAAGCAGCT
20040204C-003594 : TCTTCTTCGTCCACTCTTGTGAAACCTTCTGACCGGAGGCTGCTACAGCCTTGCCACTTC
---------+---------+---------+---------+---------+---------+ 277
SPL01_0053_F09.b.ab1 : TCTTCTTCGTCCACTCTTGTGAAACCTTCTGACCGGAGGCTGCTACAGCCTTGCCACTTC
SPL01_0053_F08.b.ab1 : TCTTCTTCGTCCACTCTTGTGAAACCTTCTGACCGGAGGCTGCTACAGCCTTGCCACTTC
20040204C-003594 : CTTTACGGGGCTCAAGCCCCCTCACACCCGTCATGCTCACTAGTACCCGATCATCCTCTG
---------+---------+---------+---------+---------+---------+ 337
SPL01_0053_F09.b.ab1 : CTTTACGGGGCTCAAGCCCCCTCACACCCGTCATGCTCACTAGTACCCGATCATCCTCTG
SPL01_0053_F08.b.ab1 : CTTTACGGGGCTCAAGCCCCCTCACACCCGTCATGCTCACTAGTACCCGATCATCCTCTG
20040204C-003594 : CCCGGGAGTGCCACCCCAGTTAACTGCCCAGGGATTCCGTCTCCACCAAAGAGCCTCTGC
---------+---------+---------+---------+---------+---------+ 397
SPL01_0053_F09.b.ab1 : CCCGGGAGTGCCACCCCAGTTAACTGCCCAGGGATTCCGTCTCCACCAAAGAGCCTCTGC
SPL01_0053_F08.b.ab1 : CCCGGGAGTGCCACCCCAGTTAACTGCCCAGGGATTCCGTCTCCACCAAAGAGCCTCTGC
20040204C-003594 : AAACCCTGCCTCCTGGAAAAACCTCTTCCCTATTGGTAATCCATGAATGCTAAGATGCAT
---------+---------+---------+---------+---------+---------+ 457
SPL01_0053_F09.b.ab1 : AAACCCTGCCTCCTGGAAAAACCTCTTCCCTATTGGTAATCCATGAATGCTAAGATGCAT
SPL01_0053_F08.b.ab1 : AAACCCTGCCTCCTGGAAAAACCTCTTCCCTATTGGTAATCCATGAATGCTAAGATGCAT
20040204C-003594 : TGTAGATATAATTTATATTCACGGCCATTTATGCCCTGCCTTATGTAGGCAGTTCAGCAC
---------+---------+---------+---------+---------+---------+ 517
SPL01_0053_F09.b.ab1 : TGTAGATATAATTTATATTCACGGCCATTTATGCCCTGCCTTATGTAGGCAGTTCAGCAC
SPL01_0053_F08.b.ab1 : TGTAGATATAATTTATATTCACGGCCATTTATGCCCTGCCTTATGTAGGCAGTTCAGCAC
20040204C-003594 : CAAGGAGAGTGCCTGTTTGCTTTTGCTTGGGTGCAAGGTCAGTGGAGGATTTACTGTGTT
---------+---------+---------+---------+---------+---------+ 577
SPL01_0053_F09.b.ab1 : CAAGGAGAGTGCCTGTTTGCTTTTGCTTGGGTGCAAGGTCAGTGGAGGATTTACTGTGTT
SPL01_0053_F08.b.ab1 : CAAGGAGAGTGCCTGTTTGCTTTTGCTTGGGTGCAAGGTCAGTGGAGGATTTACTGTGTT
20040204C-003594 : TAGGGCTCTGTAGTGCTGTTGGCACGATGTAATTTTTCCATAATAGATGAAAAGCCAAAC
---------+---------+---------+---------+---------+---------+ 637
SPL01_0053_F09.b.ab1 : TAGGGCTCTGTAGTGCTGTTGGCACGATGTAATTTTTCCATAATAGATGAAAAGCCAAAC
SPL01_0053_F08.b.ab1 : TAGGGCTCTGTAGTGCTGTTGGCACGATGTAATTTTTCCATAATAGATGAAAAGCCAAAC
20040204C-003594 : CCTGTATAAACACACTTTAATAATGGTGAAGGCACTGGCAGAGTTGTGTGCCGAGGAAAT
---------+---------+---------+---------+---------+---------+ 697
SPL01_0053_F09.b.ab1 : CCTGTATAAACACACTTTAATAATGGTGAAGGCACTGGCAGAGTTGTGTGCCGAGGAAAT
SPL01_0053_F08.b.ab1 : CCTGTATAAACACACTTTAATAATGGTGAAGGCACTGGCAGAGTTGTGTGCCGAGGAAAT
20040204C-003594 : ATTAAAGTTCACACTCCTGTAGCTTAGACTTAATTGAAGCCAGTAGTCTTCGTATTTACA
---------+---------+---------+---------+---------+---------+ 757
SPL01_0053_F09.b.ab1 : ATTAAAGTTCACACTCCTGTAGCTTAGACTTAATTGAAGCCAGTAGTCTTCGTATTTACA
SPL01_0053_F08.b.ab1 : ATTAAAGTTCACACTCCTGTAGCTTAGACTTAATTGAAGCCAGTAGTCTTCGTATTTACA
20040204C-003594 : TTTGGGTTGTTTGTTTGAATGTCAGACCTGGAGTGCTTCATCAGATGTCTTCCACTCCTC
---------+---------+---------+---------+---------+---------+ 817
SPL01_0053_F09.b.ab1 : TTTGGGTTGTTTGTTTGAATGTCAGACCTGGAGTGCTTCATCAGATGTCTTCCACTCCTC
SPL01_0053_F08.b.ab1 : TTTGGGGTGTTTGTTTGAATGTCAGACCTGGAGTGCTTCATCAGATGTCTTCCACTCCTC
20040204C-003594 : TACGTATAACTGCTTTAACCACCTG...................................
---------+---------+---------+---------+---------+---------+ 842
SPL01_0053_F09.b.ab1 : TACGTATAACTGCTTaaacacctgccccaggattccctttggtctctatcttggctcccg
SPL01_0053_F08.b.ab1 : TACGTATAACTGCTTTAACCACCTGcgnccaggattcccctttggtctctatcttgtctc
20040204C-003594 : ............................................................
---------+---------+---------+---------+---------+---------+ 842
SPL01_0053_F09.b.ab1 : gcccagggaccgagtcgcattttcccttgtgtgccctggacatcctgacatggtgcctgg
SPL01_0053_F08.b.ab1 : cgggcccagggacagaagtcgcatttttcttttgtgtgccttggacttccctgacatggt
20040204C-003594 : ............................................................
---------+---------+---------+---------+---------+---------+ 842
SPL01_0053_F09.b.ab1 : cttcctttgctccaattatctctagggctgagaggcacagattcctcattacctgttgcc
SPL01_0053_F08.b.ab1 : gcctggccttcccttgctccgcattaactccaaggctgaaaaggaaaaaattcctcatta
20040204C-003594 : ............................................................
---------+---------+---------+---------+---------+---------+ 842
SPL01_0053_F09.b.ab1 : ttcctgacccaaaaaaaaaaaaaaaaaaaaggccccatgtgccc
SPL01_0053_F08.b.ab1 : actgtttgcttccctgaccaaaaaaaaaaaaaaaaaaaaaaaggccccactgtgcctcaa
20040204C-003594 : ............................................................
---------+---------+---------+---------+---------+---------+ 842
SPL01_0053_F09.b.ab1 :
SPL01_0053_F08.b.ab1 : acctgcaagtc
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