[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20050322C-002086
Length:
1,042
Sequence:
[FASTA format sequence]
GCACTCCAGG AGGACACGCG GGCAGCTGGG GCGTGGGATT CCTGCAGAGA CCTCGGTGGA
GGGTCAGAGG CCCGCGCCGA GCCCGTGTCC ACGGGGGTCG CTCCTCCTCC GCTGGAGGGA
CTGACTTACA ATTTGGGTCC AGAGCGCACA GCGCGGGGCT ACGAGGGTGC GCAGTTCCCC
GGGTCCCCCG AGTCCCCGAC GCCCGGCGAG GAGATCTGGG TTTTCCAGCG CGCCCCGCAA
GACGCCTCTG CTCAGGAGCC CGGCGCCGGG GCCCCGCGAT GGCCGCGGGC CGCAGCCTCA
GGGAGCTGCT GCCGCGTGGG TGCCGGGGCG CCCCTCCCTA GCGGGGCGCA GCCTGCGCCC
GGTCCCCGCC CGACCAGCGG AATGGGGGGC GGAGGGTCTG CCCTGAGGGT CTGCGCGGAC
CACCGCGGGG GCATCAACTG GCTCAGCCTG AGCCCCGACG GGCAGCGCCT GCTGACGGGC
AGCGAGGACG GCACCGCCCG GCTCTGGAGC ACCGCGGACG GCCAGTGCTG CGCCCTCCTG
CAAGGACATG AAAGCTACGT GACCTTCTGC CAGCTGGAGG ACGAAGCTGC CTTCACGTGC
AGCGCTGACT GCACCATCCG GAAGTGGGAC GTGCTGACCG GGCAGTGTCT GCAGGTGTTC
CGGGGACACA CATCCATTGT GAACAGGATC CTGGTCACCA ACAACCAGCT CTTCAGCAGT
TCCTATGACC GGACAGCTCG CGCCTGGAGT GTAGACAAAG GGCAGGTGTC GCGGGAGTTC
CGGGGCCACC GCAACTGTGT GCTGACTCTA GCCTACTCTG CCCCCTGGGA CCTGCCTGGG
GCTCCCTGCG TGGAGGAGGC CGTGGCTGGG GGGCTTCTGG TGACGGGAAG CACAGACGGC
ACAGCCAAGG TGTGGCAAGT GGCCAGTGGC TGCTGCCACC AGACGCTGCG GGGCCACACG
GGCGCCGTGC TCTGCCTGGT GTTGGACACA CCTGGGCACA CAGCCTTCAC CGGCAGCACC
GACGCCACCA TCCGCGCCTG GG
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | WDR86 | hypothetical protein LOC349136 | 190 | 2e-48 | O |
|
|
| LOC442646 | 119 | 3e-27 | O | |
|
|
| LOC441300 | 119 | 3e-27 | O | |
|
|
| similar to hypothetical protein FLJ25955 | 116 | 2e-26 | ||
|
|
| FBXW7 | F-box and WD-40 domain protein 7 (archipelago homolog, Drosophila) | 112 | 3e-25 | |
|
|
| FBXW7 | F-box and WD-40 domain protein 7 (archipelago homolog, Drosophila) | 112 | 3e-25 | |
|
|
| TAF5 | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa | 109 | 4e-24 | |
|
|
| PAFAH1B1 | platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa | 100 | 2e-21 | |
|
|
| WDR5 | WD repeat domain 5 | 100 | 2e-21 | O |
|
|
| WDR5 | WD repeat domain 5 | 100 | 2e-21 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Fbxw7 | F-box and WD-40 domain protein 7, archipelago homolog (Drosophila) | 112 | 3e-25 | |
|
|
| Taf5 | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor | 109 | 3e-24 | |
|
|
| 1700123D08Rik | RIKEN cDNA 1700123D08 gene | 107 | 2e-23 | O |
|
|
| Pafah1b1 | platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit | 100 | 2e-21 | |
|
|
| Wdr5 | WD repeat domain 5 | 100 | 1e-21 | O |
|
|
| Fbxw11 | F-box and WD-40 domain protein 11 | 97.1 | 2e-20 | |
|
|
| Wdr5b | WD repeat domain 5B | 94.7 | 8e-20 | O |
|
|
| Btrc | beta-transducin repeat containing protein | 92.8 | 3e-19 | |
|
|
| Plrg1 | pleiotropic regulator 1, PRL1 homolog (Arabidopsis) | 89.4 | 3e-18 | |
|
|
| Copb2 | coatomer protein complex, subunit beta 2 (beta prime) | 87 | 2e-17 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens hypothetical protein LOC349136, mRNA (cDNA clone IMAGE:6193025), partial cds | 603 | e-171 | |
|
|
| Mus musculus cDNA clone IMAGE:6825904, partial cds | 587 | e-166 | |
|
|
| 502258 MARC 2BOV Bos taurus cDNA 5', mRNA sequence | 73.8 | 1e-11 | |
|
|
| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930021D14 product:hypothetical Haem peroxidase superfamily containing protein, full insert sequence | 42.1 | 0.047 | |
|
|
| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430060P14 product:G protein beta subunit-like, full insert sequence | 42.1 | 0.047 | |
|
|
| Homo sapiens phosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets) (PHEX), transcript variant 1843529, mRNA | 40.1 | 0.19 | |
|
|
| Mus musculus RIKEN cDNA 1700001O22 gene (1700001O22Rik), mRNA | 40.1 | 0.19 | |
|
|
| Bos taurus endothelin converting enzyme-1a (ECE-1a) mRNA, complete cds | 40.1 | 0.19 | |
|
|
| Homo sapiens complement component 1, q subcomponent-like 1 (C1QL1), mRNA | 38.2 | 0.73 | |
|
|
| Homo sapiens histone deacetylase 10 (HDAC10), mRNA | 38.2 | 0.73 |
|
20050322C-002086 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0031_F06.b.ab1 : aggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0011_G02.b.ab1 :
20050322C-002086 : .........................GCACTCCAGGAGGACACGCGGGCAGCTGGGGCGTG
---------+---------+---------+---------+---------+---------+ 35
OVR01_0031_F06.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxGCACTCCAGGAGGACACGCGGGCAGCTGGGGCGTG
OVR01_0011_G02.b.ab1 :
20050322C-002086 : GGATTCCTGCAGAGACCTCGGTGGAGGGTCAGAGGCCCGCGCCGAGCCCGTGTCCACGGG
---------+---------+---------+---------+---------+---------+ 95
OVR01_0031_F06.b.ab1 : GGATTCCTGCAGAGACCTCGGTGGAGGGTCAGAGGCCCGCGCCGAGCCCGTGTCCACGGG
OVR01_0011_G02.b.ab1 : ncaacaattgaacatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20050322C-002086 : GGTCGCTCCTCCTCCGCTGGAGGGACTGACTTACAATTTGGGTCCAGAGCGCACAGCGCG
---------+---------+---------+---------+---------+---------+ 155
OVR01_0031_F06.b.ab1 : GGTCGCTCCTCCTCCGCTGGAGGGACTGACTTACAATTTGGGTCCAGAGCGCACAGCGCG
OVR01_0011_G02.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCACAGCGCG
20050322C-002086 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
---------+---------+---------+---------+---------+---------+ 215
OVR01_0031_F06.b.ab1 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
OVR01_0011_G02.b.ab1 : GGGCTACGAGGGTGCGCAGTTCCCCGGGTCCCCCGAGTCCCCGACGCCCGGCGAGGAGAT
20050322C-002086 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAGCCCGGCGCCGGGGCCCC
---------+---------+---------+---------+---------+---------+ 275
OVR01_0031_F06.b.ab1 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAgcccggcgccggggcccc
OVR01_0011_G02.b.ab1 : CTGGGTTTTCCAGCGCGCCCCGCAAGACGCCTCTGCTCAGGAgcccggcgccggggcccc
20050322C-002086 : GCGATGGCCGCGGGCCGCAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
---------+---------+---------+---------+---------+---------+ 335
OVR01_0031_F06.b.ab1 : gcgatggccgcgggccgcAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
OVR01_0011_G02.b.ab1 : gcgatggccgcgggccgcAGCCTCAGGGAGCTGCTGCCGCGTGGGTGCCGGGGCGCCCCT
20050322C-002086 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
---------+---------+---------+---------+---------+---------+ 395
OVR01_0031_F06.b.ab1 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
OVR01_0011_G02.b.ab1 : CCCTAGCGGGGCGCAGCCTGCGCCCGGTCCCCGCCCGACCAGCGGAATGGGGGGCGGAGG
20050322C-002086 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
---------+---------+---------+---------+---------+---------+ 455
OVR01_0031_F06.b.ab1 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
OVR01_0011_G02.b.ab1 : GTCTGCCCTGAGGGTCTGCGCGGACCACCGCGGGGGCATCAACTGGCTCAGCCTGAGCCC
20050322C-002086 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
---------+---------+---------+---------+---------+---------+ 515
OVR01_0031_F06.b.ab1 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
OVR01_0011_G02.b.ab1 : CGACGGGCAGCGCCTGCTGACGGGCAGCGAGGACGGCACCGCCCGGCTCTGGAGCACCGC
20050322C-002086 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
---------+---------+---------+---------+---------+---------+ 575
OVR01_0031_F06.b.ab1 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
OVR01_0011_G02.b.ab1 : GGACGGCCAGTGCTGCGCCCTCCTGCAAGGACATGAAAGCTACGTGACCTTCTGCCAGCT
20050322C-002086 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
---------+---------+---------+---------+---------+---------+ 635
OVR01_0031_F06.b.ab1 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
OVR01_0011_G02.b.ab1 : GGAGGACGAAGCTGCCTTCACGTGCAGCGCTGACTGCACCATCCGGAAGTGGGACGTGCT
20050322C-002086 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
---------+---------+---------+---------+---------+---------+ 695
OVR01_0031_F06.b.ab1 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
OVR01_0011_G02.b.ab1 : GACCGGGCAGTGTCTGCAGGTGTTCCGGGGACACACATCCATTGTGAACAGGATCCTGGT
20050322C-002086 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
---------+---------+---------+---------+---------+---------+ 755
OVR01_0031_F06.b.ab1 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
OVR01_0011_G02.b.ab1 : CACCAACAACCAGCTCTTCAGCAGTTCCTATGACCGGACAGCTCGCGCCTGGAGTGTAGA
20050322C-002086 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
---------+---------+---------+---------+---------+---------+ 815
OVR01_0031_F06.b.ab1 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
OVR01_0011_G02.b.ab1 : CAAAGGGCAGGTGTCGCGGGAGTTCCGGGGCCACCGCAACTGTGTGCTGACTCTAGCCTA
20050322C-002086 : CTCTGCCCCCTG*GGACCTGCCTGGGGCTCCCTGCGTGGAGGAGGCC*GTGGCTGGGGGG
---------+---------+---------+---------+---------+---------+ 873
OVR01_0031_F06.b.ab1 : CTCTGCCCCCTGGGGACCTGCCTGGGGGTCCCTGCGTGGAAGAGGCCCGGGGCTGGGGGG
OVR01_0011_G02.b.ab1 : CTCTGCCCCCTG*GGACCTGCCTGGGGCTCCCTGCGTGGAGGAGGCC*GTGGCTGGGGGG
20050322C-002086 : CTTCTGGTGACGGGAAGCACAGACGGCACAGCCAAGGTGTGGCAAGTGGCCAGTGGCTGC
---------+---------+---------+---------+---------+---------+ 933
OVR01_0031_F06.b.ab1 : Ctttctggtgacgggaagcacagacgggacaaccaaggggggggcaggtgggcagtgggc
OVR01_0011_G02.b.ab1 : CTTCTGGTGACGGGAAGCACAGACGGCACAGCCAAGGTGTGGCAAGTGGCCAGTGGCTGC
20050322C-002086 : TGCCACCAGACGCTGCGGGGCCACACGGGCGCCGTGCTCTGCCTGGTGTTGGACACACCT
---------+---------+---------+---------+---------+---------+ 993
OVR01_0031_F06.b.ab1 : tggtgccaccaaacgctgcgggggccacccgggcgcccgggttttgcctgggggttggac
OVR01_0011_G02.b.ab1 : TGCCACCAGACGCTGCGGGGCCACACGGGCGCCGTGCTCTGCCTGGTGTTGGACACACCT
20050322C-002086 : GGGCACACAGCCTTCACCGGCAGCACCGACGCCACCATCCGCGCCTGGG...........
---------+---------+---------+---------+---------+---------+ 1042
OVR01_0031_F06.b.ab1 : aaaccttgggcccccaagccctttcccggggagaaccgaaagcccccctttcccccgccc
OVR01_0011_G02.b.ab1 : GGGCACACAGCCTTCACCGGCAGCACCGACGCCACCATCCGCGCCTGGGacttcttgagt
20050322C-002086 : ............................................................
---------+---------+---------+---------+---------+---------+ 1042
OVR01_0031_F06.b.ab1 : tgggaacattcctgagaggggggaaccccttgggccggggttttcgggggagccccccag
OVR01_0011_G02.b.ab1 : ggggaggcgctgcgcgtgttccgggagcacaggggctcatcatctgtcctggagctggtg
20050322C-002086 : ............................................................
---------+---------+---------+---------+---------+---------+ 1042
OVR01_0031_F06.b.ab1 : gggcttctccctttattttttttttttgggaaagttgggttggagaaaccccgggggacc
OVR01_0011_G02.b.ab1 : aaccggcacgtgtactcgggcaacggcgacagggacggttcaagtgctgggttggcggga
20050322C-002086 : ............................................................
---------+---------+---------+---------+---------+---------+ 1042
OVR01_0031_F06.b.ab1 : cggtggggtatttcttctcgggggcggccaaggcccccccccccaaaaaaga
OVR01_0011_G02.b.ab1 : ccggggcgaggggcgtggcgccacgtttcccccgccccccaaaaccccggggtgaagccc
20050322C-002086 : ............................................................
---------+---------+---------+---------+---------+---------+ 1042
OVR01_0031_F06.b.ab1 :
OVR01_0011_G02.b.ab1 : ccccttaaagataccccccgcccggggggccc
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