[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20050322C-005293
Length:
983
Sequence:
[FASTA format sequence]
AGGCAGAAGA AGACAGACAG GCCAACAGGT TCAGACAGCC TGCTCGCCGC TCCACGCCCC
CCACTGCTCT CCTGCCCCAG CGCCGAGATG GATACCCCTG TTAGGGACCT AGACAAGTTC
ATCGAAGACC ACCTCCTGCC AAACACATGT TTCCGAACGC AGGTCAAGGA AGCCATCGAC
ATCGTCTGCG GTTTCCTGAA GGAGAGGTGC TTCCAGGGGA CCGCCGACCC TGTTCGCGTC
TCCAAAGTTG TGAAGGGTGG CTCCTCGGGC AAAGGCACGA CCCTCAGGGG CCGATCAGAT
GCTGACCTCG TCGTCTTCCT CACCAAGCTC ACAAGTTTTG AGGATCAGCT TCAGCTCCGA
GAAGAATTCA TCCAGGAAAT TCGGAGACAG CTGGAAGCCT GTCAAAAAGA ACAAAAGTTT
AAAGTGACGT TTGAGGTCCA GACTCCACGA CAGGAGAACC CCCGTGCCCT CAGCTTCGTG
CTCAGCTCCC CCCAGCTCCA GCAGGAGGTG GAGTTTGATG TCCTGCCCGC CTTTGATGCC
CTGGGTCAGT GGACCCCGGG CTACAAACCC AACCCGGAAA TCTACGTCCA GCTTATCAAA
GAGTGCAAGT CCCTAGGGAA AGAGGGCGAG TTTTCCACCT GCTTCACGGA GCTGCAGCGA
GACTTCCTGA GGAACCGACC AACCAAGCTG AAGAGCCTCA TCCGCCTTGT CAAGCACTGG
TACCAGACGT GTAAGAAGCC TCATGGAAAT AAACTGCCCC CACAGTATGC CCTGGAGCTC
CTGACAGTCT ATGCATGGGA GCAAGGAAGC GGGAAAACAG ATTTTAGCAC AGCTCAGGGA
TTTCAGACTG TTTTGGAATT AGTCCTAAAG CATAAGAAGC TTTGCATCTT CTGGGAAGCA
TATTATAACT TTAAAAACCC TGTCGTTGGA CGATATCTGA CTGAGCAACT CAAGAAACCC
AGGCCTGTGA TTCTGGACCC GGC
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | 431 | e-121 | O | ||
|
|
| 431 | e-121 | O | ||
|
|
| OAS3 | 2'-5'-oligoadenylate synthetase 3, 100kDa | 319 | 2e-87 | |
|
|
| 284 | 6e-77 | |||
|
|
| 284 | 6e-77 | |||
|
|
| OASL | 2'-5'-oligoadenylate synthetase-like | 199 | 3e-51 | O |
|
|
| OASL | 2'-5'-oligoadenylate synthetase-like | 125 | 4e-29 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Oas1g | 2'-5' oligoadenylate synthetase 1G | 379 | e-105 | O |
|
|
| Oas1a | 2'-5' oligoadenylate synthetase 1A | 376 | e-104 | O |
|
|
| Oas1f | 2'-5' oligoadenylate synthetase 1F | 327 | 9e-90 | O |
|
|
| Oas3 | 2'-5' oligoadenylate synthetase 3 | 306 | 2e-83 | |
|
|
| Oas1c | 2'-5' oligoadenylate synthetase 1C | 297 | 8e-81 | O |
|
|
| Oas2 | 2'-5' oligoadenylate synthetase 2 | 293 | 1e-79 | |
|
|
| Oas1e | 2'-5' oligoadenylate synthetase 1E | 290 | 7e-79 | O |
|
|
| Oas1d | 2'-5' oligoadenylate synthetase 1D | 287 | 6e-78 | O |
|
|
| Oas1h | 2'-5' oligoadenylate synthetase 1H | 275 | 2e-74 | O |
|
|
| Oas1b | 2'-5' oligoadenylate synthetase 1B | 237 | 9e-63 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Sus scrofa 2'-5' oligoadenylate synthetase 1 (Oas1) mRNA, complete cds | 1925 | 0.0 | O |
|
|
| Bos taurus 2'-5'-oligoadenylate synthetase 1 (OAS1) mRNA, complete cds | 547 | e-154 | O |
|
|
| Bos taurus OAS1 mRNA for 2'-5'-oligoadenylate synthetase, complete cds | 519 | e-146 | O |
|
|
| 961130 MARC 2BOV Bos taurus cDNA 3', mRNA sequence | 141 | 6e-32 | |
|
|
| 702461 MARC 6BOV Bos taurus cDNA 3', mRNA sequence | 133 | 2e-29 | |
|
|
| Mus musculus 2'-5'olygoadenylate synthetase 1G (Oas1g) mRNA, complete cds | 125 | 4e-27 | O |
|
|
| Homo sapiens cDNA FLJ41534 fis, clone BRTHA2016552, moderately similar to (2'-5') oligo A synthetase E16 | 103 | 1e-20 | |
|
|
| Mus musculus 2'-5' oligoadenylate synthetase 1B, mRNA (cDNA clone MGC:19005 IMAGE:4016177), complete cds | 71.9 | 5e-11 | O |
|
|
| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732478K05 product:2'-5' oligoadenylate synthetase 1C, full insert sequence | 61.9 | 5e-08 | O |
|
|
| Homo sapiens P/OKcl.4 mRNA for 2'-5' oligoadenylate synthetase 3, complete cds. | 58 | 7e-07 |
|
20050322C-005293 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0025_C08.b.ab1 : attttaccgaccctaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0057_B01.b.ab1 :
TES01_0075_B06.b.ab1 :
20050322C-005293 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0025_C08.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0057_B01.b.ab1 : tttttggatgaacxxxxxxxxxxxxxxxxxxxxxxxxx
TES01_0075_B06.b.ab1 :
20050322C-005293 : ...........................................AGGCAGAAGAAGACAGA
---------+---------+---------+---------+---------+---------+ 17
AMP01_0025_C08.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGGCAGAAGAAGACAGA
THY01_0057_B01.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAAGAAGACAGA
TES01_0075_B06.b.ab1 : nttggcgttggctctgggaatctacagcagcccaactcaggcagaagaagacaga
20050322C-005293 : CAGGCCAACAGGTTCAGACAGCCTGCTCGCCGCTCCACGCCCCCCACTGCTCTCCTGCCC
---------+---------+---------+---------+---------+---------+ 77
AMP01_0025_C08.b.ab1 : CAGGCCAACAGGTTCAGACAGCCTGCTCGCCGCTCCACGCCCCCCACTGCTCTCCTGCCC
THY01_0057_B01.b.ab1 : CAGGCCAACAGGTTCAGACAGCCTGCTCGCCGCTCCACGCCCCCCACTGCTCTCCTGCCC
TES01_0075_B06.b.ab1 : caggccaacaggttcagatagcctgctcgccgctccacgccccccactgctctcctgccc
20050322C-005293 : CAGCGCCGAGATGGATACCCCTGTTAGGGACCTAGACAAGTTCATCGAAGACCACCTCCT
---------+---------+---------+---------+---------+---------+ 137
AMP01_0025_C08.b.ab1 : CAGCGCCGAGATGGATACCCCTGTTAGGGACCTAGACAAGTTCATCGAAGACCACCTCCT
THY01_0057_B01.b.ab1 : CAGCGCCGAGATGGATACCCCTGTTAGGGACCTAGACAAGTTCATCGAAGACCACCTCCT
TES01_0075_B06.b.ab1 : cagcgccgagatggATACCCCTGTTAGGGACCTAGACAAGTTCATCGAAGACCACCTCCT
20050322C-005293 : GCCAAACACATGTTTCCGAACGCAGGTCAAGGAAGCCATCGACATCGTCTGCGGTTTCCT
---------+---------+---------+---------+---------+---------+ 197
AMP01_0025_C08.b.ab1 : GCCAAACACATGTTTCCGAACGCAGGTCAAGGAAGCCATCGACATCGTCTGCGGTTTCCT
THY01_0057_B01.b.ab1 : GCCAAACACATGTTTCCGAACGCAGGTCAAGGAAGCCATCGACATCGTCTGCGGTTTCCT
TES01_0075_B06.b.ab1 : GCCAAACACATGTTTCCGAACGCAGGTCAAGGAAGCCATCGACATCGTCTGCGGTTTCCT
20050322C-005293 : GAAGGAGAGGTGCTTCCAGGGGACCGCCGACCCTGTTCGCGTCTCCAAAGTTGTGAAGGG
---------+---------+---------+---------+---------+---------+ 257
AMP01_0025_C08.b.ab1 : GAAGGAGAGGTGCTTCCAGGGGACCGCCGACCCTGTTCGCGTCTCCAAAGTTGTGAAGGG
THY01_0057_B01.b.ab1 : GAAGGAGAGGTGCTTCCAGGGGACCGCCGACCCTGTTCGCGTCTCCAAAGTTGTGAAGGG
TES01_0075_B06.b.ab1 : GAAGGAGAGGTACTTCCAGGGGACCGCCGACCCTGTTCGCGTCTCCAAAGTTGTGAAGGG
20050322C-005293 : TGGCTCCTCGGGCAAAGGCACGACCCTCAGGGGCCGATCAGATGCTGACCTCGTCGTCTT
---------+---------+---------+---------+---------+---------+ 317
AMP01_0025_C08.b.ab1 : TGGCTCCTCGGGCAAAGGCACGACCCTCAGGGGCCGATCAGATGCTGACCTCGTCGTCTT
THY01_0057_B01.b.ab1 : TGGCTCCTCGGGCAAGGGCACGACCCTCAGGGGCCGATCAGATGCTGACCTCGTCGTCTT
TES01_0075_B06.b.ab1 : TGGCTCCTCAGGCAAAGGCACGACCCTCAGGGGCCGATCAGATGCTGACCTCGTCGTCTT
20050322C-005293 : CCTCACCAAGCTCACAAGTTTTGAGGATCAGCTTCAGCTCCGAGAAGAATTCATCCAGGA
---------+---------+---------+---------+---------+---------+ 377
AMP01_0025_C08.b.ab1 : CCTCACCAAGCTCACAAGTTTTGAGGATCAGCTTCAGCTCCGAGAAGAATTCATCCAGGA
THY01_0057_B01.b.ab1 : CCTCACCAAGCTCACAAGTTTTGAGGATCAGCTTCAGCTCCGAGAAGAATTCATCCAGGA
TES01_0075_B06.b.ab1 : CCTCACCAAGCTCACAAGTTTTGAGGATCAGCTTCAGCTCCGAGAAGAATTCATCCAGGA
20050322C-005293 : AATTCGGAGACAGCTGGAAGCCTGTCAAAAAGAACAAAAGTTTAAAGTGACGTTTGAGGT
---------+---------+---------+---------+---------+---------+ 437
AMP01_0025_C08.b.ab1 : AATTCGGAGACAGCTGGAAGCCTGTCAAAAAGAACAAAAGTTTAAAGTGACGTTTGAGGT
THY01_0057_B01.b.ab1 : AATTCGGAGACAGCTGGAAGCCTGTCAAAAAGAACAAAAGTTTAAAGTGACGTTTGAGGT
TES01_0075_B06.b.ab1 : AATTCGGAGACAGCTGGAAGCCTGTCAAAAAGAACAAAAGTTTAAAGTGACGTTTGAGGT
20050322C-005293 : CCAGACTCCACGACAGGAGAACCCCCGTGCCCTCAGCTTCGTGCTCAGCTCCCCCCAGCT
---------+---------+---------+---------+---------+---------+ 497
AMP01_0025_C08.b.ab1 : CCAGACTCCACGACAGGAGAACCCCCGTGCCCTCAGCTTCGTGCTCAGCTCCCCCCAGCT
THY01_0057_B01.b.ab1 : CCAGACTCCACGACAGGAGAACCCCCGTGCCCTCAGCTTCGTGCTCAGCTCCCCCCAGCT
TES01_0075_B06.b.ab1 : CCAGACTCCACGACAGGAGAACCCCCGTGCCCTCAGCTTCGTGCTCAGCTCCCCCCAGCT
20050322C-005293 : CCAGCAGGAGGTGGAGTTTGATGTCCTGCCCGCCTTTGATGCCCTGGGTCAGTGGACCCC
---------+---------+---------+---------+---------+---------+ 557
AMP01_0025_C08.b.ab1 : CCAGCAGGAGGTGGAGTTTGATGTCCTGCCCGCCTTTGATGCCCTGGGTCAGTGGACCCC
THY01_0057_B01.b.ab1 : CCAGCAGGAGGTGGAGTTTGATGTCCTGCCCGCCTTTGATGCCCTGGGTCAGTGGACCCC
TES01_0075_B06.b.ab1 : CCAGCAGGAGGTGGAGTTTGATGTCCTGCCCGCCTTTGATGCCCTGGGTCAGTGGACCCC
20050322C-005293 : GGGCTACAAACCCAACCCGGAAATCTACGTCCAGCTTATCAAAGAGTGCAAGTCCCTAGG
---------+---------+---------+---------+---------+---------+ 617
AMP01_0025_C08.b.ab1 : GGGCTACAAACCCAACCCGGAAATCTACGTCCAGCTTATCAAAGAGTGCAAGTCCCTAGG
THY01_0057_B01.b.ab1 : GGGCTACAAACCCAACCCGGAAATCTACGTCCAGCTTATCAAAGAGTGCAAGTCCCTAGG
TES01_0075_B06.b.ab1 : GGGCTACAAACCCAACCCGGAAATCTACGTCCAGCTTATCAAAGAGTGCAAGTCCCTAGG
20050322C-005293 : GAAAGAGGGCGAGTTTTCCACCTGCT*TCACGGAGCTGCAGCGAGACTTCCTGAGGAACC
---------+---------+---------+---------+---------+---------+ 676
AMP01_0025_C08.b.ab1 : GAAAGAGGGCGAGTTTTCCACCTGCT*TCACGGAGCTGCAGCGAGACTTCCCGAGGAACC
THY01_0057_B01.b.ab1 : GAAAGAGGGCGAGTTTTCCACCTGCT*TCACGGAGCTGCAGCGAGACTTCCTGAGGAACC
TES01_0075_B06.b.ab1 : GAAAGAGGGCGAGTTTTCCACCTGCTTTCACG*AGCTGCAGCGAGACTTCCTGAGGAACC
20050322C-005293 : GACCAACCAAGCTGAAGAGCCTCATCCGCCTTGTCAAGCACTGGTACCAGACGTGTAAGA
---------+---------+---------+---------+---------+---------+ 736
AMP01_0025_C08.b.ab1 : GACCCACCAAGCTGAAGAGCCTCATCCGCCTTGTCAAGCACTGGTACCAGACGTGTAAGA
THY01_0057_B01.b.ab1 : GACCAACCAAGCTGAAGAGCCTCATCCGCCTTGTCAAGCACTGGTACCAGACGTGTAAGA
TES01_0075_B06.b.ab1 : GACCAACCA*GCTGAAGAGCCTCATCCGCCTTGTCAAGCACTGGTACCAGACGTGTAAGA
20050322C-005293 : AGCCTCATGGAAATAAACTGCCCCCACAGTATGCCCT*GGAGCTCCTGACAGTCTATGCA
---------+---------+---------+---------+---------+---------+ 795
AMP01_0025_C08.b.ab1 : AGCCTCATGGAAATAAACTGCCCCCACAGTATGCCCT*GNAGCTCCTGACAGTCTATGCA
THY01_0057_B01.b.ab1 : AGCCTCATGGAAATAAACTGCCCCCACAGTATGCCCT*GGAGCTCCTGACAGTCTATGCA
TES01_0075_B06.b.ab1 : AGC*TCATGGAAATAAACTGCCCCCACAGTATGCCCTTGGAGCTCCTGAAAGTCTTTGCT
20050322C-005293 : TGGGAGCAAGGAAGCGGGAAAACAGATTTTAGCACAGCTCAGGGATTTCAGACTGTTTTG
---------+---------+---------+---------+---------+---------+ 855
AMP01_0025_C08.b.ab1 : TGGGAACAAGGAAGCGGGGAAACAGATTTTAGCACAcctcagggatttcaaactgttttt
THY01_0057_B01.b.ab1 : TGGGAGCAAGGAAGCGGGAAAACAGATTTTAGCACAGCTCAGGGATTTCAGACTGTTTTG
TES01_0075_B06.b.ab1 : TGGGAACAAGGAACCGGGAAAACcgaatttaccccgctccaggaattccaactgttttgg
20050322C-005293 : GAATTAGTCCTAAAGCATAAGAAGCTTTGCATCTTCTGGGAAGCATATTATAACTTTAAA
---------+---------+---------+---------+---------+---------+ 915
AMP01_0025_C08.b.ab1 : gaatttattcctaaagcataagaagcttggcatcctctggaagcctattaaaacttaaaa
THY01_0057_B01.b.ab1 : GAATTAGTCCTAAAGCATAAGAAGCTTTGCATCTTCTGGGAAGCATATTATAACTTTAAA
TES01_0075_B06.b.ab1 : aatatccctaaaccataaaaagtttttcatcttccgggaaaccttttttaacttttaaaa
20050322C-005293 : AACCCTGTCGTTGGACGATATCTGACTGAGCAACTCAAGAAACCCAGGCCTGTGATTCTG
---------+---------+---------+---------+---------+---------+ 975
AMP01_0025_C08.b.ab1 : ccccgtccttggacgaaatctactgaaccactcaaaaacccagcctgggatttggaaccg
THY01_0057_B01.b.ab1 : AACCCTGTCGTTGGACGATATCTGACTGAGCAACTCAAGAAACCCAGGCCTGTGATTCTG
TES01_0075_B06.b.ab1 : acccctgtccttggaaaattttcgcctgaccacccccaaaaacccgggcccgggaatttg
20050322C-005293 : GACCCGGC....................................................
---------+---------+---------+---------+---------+---------+ 983
AMP01_0025_C08.b.ab1 : ctgaccctaagcaacttttgtgggggaaacaatacactgcaccccctgtaaaagggccca
THY01_0057_B01.b.ab1 : GACCCGGCtgaccctacaggcaacgttggtgggtggaaacccatacagctgggcagcagc
TES01_0075_B06.b.ab1 : ggacccgggtaacccttaagggaattgtgtgggggggaaaaaaaaaaaattgggaaccct
20050322C-005293 : ............................................................
---------+---------+---------+---------+---------+---------+ 983
AMP01_0025_C08.b.ab1 : atcggcgaatacccgctttttaaagaacaggtcccggggaatcgaagggtccccaagcca
THY01_0057_B01.b.ab1 : tggtagaaggggcactaatcttggctgaattatccggtgcttttttaaatggaaaccggg
TES01_0075_B06.b.ab1 : ttggaaaaagggcccacactcgggcgaaaaattcccggcttttttaaaaaggaaagagtc
20050322C-005293 : ............................................................
---------+---------+---------+---------+---------+---------+ 983
AMP01_0025_C08.b.ab1 : agcccccaat
THY01_0057_B01.b.ab1 : tccccgggtgggaatcccgga
TES01_0075_B06.b.ab1 : ccccgggggaacccggaaaggggtcccccgaggaaaaagccccctcccggaggggaaaat
20050322C-005293 : ............................................................
---------+---------+---------+---------+---------+---------+ 983
AMP01_0025_C08.b.ab1 :
THY01_0057_B01.b.ab1 :
TES01_0075_B06.b.ab1 : attttatgggcccaaaaacatcttaaaaagaggatcccgtgaacacccgggaaaaccccc
20050322C-005293 : ............................................................
---------+---------+---------+---------+---------+---------+ 983
AMP01_0025_C08.b.ab1 :
THY01_0057_B01.b.ab1 :
TES01_0075_B06.b.ab1 : ccttcttatgggggggggggcggaaccctctctcctaagggcccattttgtgttacacaa
20050322C-005293 : ............................................................
---------+---------+---------+---------+---------+---------+ 983
AMP01_0025_C08.b.ab1 :
THY01_0057_B01.b.ab1 :
TES01_0075_B06.b.ab1 : acctcacacaaagtggttgtttcccctctgtgtgttatttggn
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